STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36943.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
EGS36953.1
Identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481.
       0.747
EGS37020.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
     0.715
EGS37053.1
Hypothetical protein.
  
     0.685
EGS39235.1
Hypothetical protein.
  
     0.673
EGS36983.1
Hypothetical protein.
  
     0.635
EGS36917.1
Hypothetical protein.
  
     0.634
EGS36916.1
Aldo/keto reductase family protein.
       0.621
ftsL
Cell division protein FtsL; Identified by match to protein family HMM PF04977; match to protein family HMM TIGR02209.
  
     0.545
EGS37880.1
Hypothetical protein.
  
     0.540
EGS35977.1
Hypothetical protein.
  
     0.506
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.