STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS37027.1Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. (172 aa)    
Predicted Functional Partners:
EGS37018.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 
 0.969
EGS36930.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
 
   
 0.968
EGS37309.1
Putative CoA-substrate-specific enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.
     
 0.712
EGS36940.1
Putative molybdenum cofactor biosynthesis protein C; Identified by match to protein family HMM PF00005; match to protein family HMM PF02687.
   
 
 0.657
EGS36985.1
Putative chlorophyll synthesis pathway protein BchC; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
       0.496
ftsZ
Cell division protein FtsZ; Identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065.
   
 
 0.428
EGS37907.1
TrkA C-terminal domain protein; Identified by match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254.
 
   
 0.422
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.