STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepEIdentified by match to protein family HMM PF03051. (439 aa)    
Predicted Functional Partners:
EGS36986.1
Putative Xaa-Pro dipeptidyl-peptidase; Identified by match to protein family HMM PF02129; match to protein family HMM PF08530; match to protein family HMM PF09168.
     
 0.566
pepO
Neprilysin; Identified by match to protein family HMM PF01431; match to protein family HMM PF05649.
  
   
 0.550
pstS
Phosphate binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136.
       0.532
pstB
Phosphate ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972.
       0.523
phoU
Phosphate transport system regulatory protein PhoU; Identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135.
       0.520
pstA
Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974.
       0.515
pstC
Phosphate ABC transporter, permease protein PstC; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138.
       0.515
EGS36550.1
Creatinase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321.
     
 0.486
EGS37023.1
Putative Xaa-Pro dipeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321.
     
 0.486
pepN
Membrane alanyl aminopeptidase; Identified by match to protein family HMM PF01433.
     
 0.482
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.