STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
areBBenzyl alcohol dehydrogenase AreB; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. (373 aa)    
Predicted Functional Partners:
adh
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465.
  
 
 0.979
EGS37336.1
Zinc-binding alcohol dehydrogenase family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR02822.
 
 
 
 0.630
argG
Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032.
    
 0.605
adhP
Alcohol dehydrogenase, propanol-preferring; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
 
 
 
0.572
EGS35767.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
   
  0.555
EGS36055.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
   
  0.555
EGS36858.1
Transcriptional regulator, HxlR family; Identified by match to protein family HMM PF01638.
       0.533
dhaT
1,3-propanediol dehydrogenase; Identified by match to protein family HMM PF00465.
  
 
 0.529
EGS36081.1
Cytidine and deoxycytidylate deaminase zinc-binding region; Identified by match to protein family HMM PF00383.
  
    0.471
EGS36834.1
Putative low molecular weight protein-tyrosine-phosphatase PtpA; Identified by match to protein family HMM PF01451.
       0.453
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.