STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
guaCGMP reductase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00478; match to protein family HMM TIGR01306. (324 aa)    
Predicted Functional Partners:
EGS38597.1
GMP synthase (glutamine-hydrolyzing), C-terminal domain protein; Identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM PF06508; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888.
 0.999
purA
Adenylosuccinate synthase; Identified by match to protein family HMM PF00709; match to protein family HMM TIGR00184.
 
 
 0.999
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355.
  
 
 0.967
xpt
Xanthine phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01744.
  
 
 0.954
apt
Adenine phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01090.
  
 
 0.953
purB
Adenylosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928.
  
  
 0.937
EGS37050.1
Phosphoribosyl transferase domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00156.
  
 
 0.921
EGS36951.1
Guanylate kinase family protein.
    
 0.913
hpt
Hypoxanthine phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203.
    
 0.911
hpt-2
Hypoxanthine phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203.
    
 0.911
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.