STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS38783.1Putative azaleucine resistance protein AzlC; Identified by match to protein family HMM PF03591. (283 aa)    
Predicted Functional Partners:
EGS38758.1
Branched-chain amino acid transport protein; Identified by match to protein family HMM PF05437.
 
  
 0.995
EGS37957.1
Hypothetical protein.
  
     0.762
EGS38046.1
Phage integrase, N-terminal SAM domain protein; Identified by match to protein family HMM PF02899.
 
    0.645
EGS36931.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
 
    0.604
EGS36621.1
Hypothetical protein.
  
     0.574
EGS35571.1
Hypothetical protein.
 
     0.545
EGS39558.1
Hypothetical protein.
  
     0.537
EGS38775.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02518.
       0.523
EGS36612.1
Hypothetical protein.
  
     0.504
EGS35862.1
Putative membrane protein; Identified by match to protein family HMM PF06612; match to protein family HMM TIGR02327.
  
     0.469
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.