STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
purMPhosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. (345 aa)    
Predicted Functional Partners:
purE
Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162.
 
 
 0.999
purC
Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081.
 
  
 0.999
purS
Phosphoribosylformylglycinamidine synthase, purS protein; Identified by match to protein family HMM PF02700; match to protein family HMM TIGR00302.
  
 0.999
purQ
Phosphoribosylformylglycinamidine synthase I; Identified by match to protein family HMM PF07685; match to protein family HMM TIGR01737.
 
 0.999
purL
Phosphoribosylformylglycinamidine synthase II; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR01736.
  
 
 0.999
purF
Amidophosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134.
  
 0.999
purN
Phosphoribosylglycinamide formyltransferase; Identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639.
  
 0.999
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355.
 
  
 0.999
purD
Phosphoribosylamine--glycine ligase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877.
  
 0.999
purK
Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Identified by match to protein family HMM PF02222; match to protein family HMM TIGR01161.
 
 
 0.988
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.