STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36315.1Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659. (243 aa)    
Predicted Functional Partners:
EGS36283.1
Acyl transferase domain protein; Identified by match to protein family HMM PF00698.
 
 0.993
fabF
Beta-ketoacyl-acyl-carrier-protein synthase II; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; match to protein family HMM TIGR03150.
 
 0.992
EGS36312.1
Identified by match to protein family HMM PF07977.
 
 
 0.968
fabHA
Beta-ketoacyl-acyl-carrier-protein synthase III; Identified by match to protein family HMM PF08541; match to protein family HMM PF08545; match to protein family HMM TIGR00747.
 
  
 0.958
EGS36298.1
Putative acyl carrier protein; Identified by match to protein family HMM PF00550.
  
 0.956
EGS36334.1
Putative acetyl-CoA carboxylase, biotin carboxylase subunit; Identified by match to protein family HMM PF00289; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786.
 
 
 0.954
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Identified by match to protein family HMM PF07977; match to protein family HMM TIGR01750.
 
 
 0.952
accB
acetyl-CoA carboxylase, biotin carboxyl carrier protein; Identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531.
  
  
 0.948
accA
acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Identified by match to protein family HMM PF03255.
  
  
 0.945
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Identified by match to protein family HMM TIGR00515.
 
  
 0.943
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.