STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36313.1Putative membrane protein. (200 aa)    
Predicted Functional Partners:
EGS36319.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
     0.951
EGS36309.1
Cobalt transport protein; Identified by match to protein family HMM PF02361.
 
   
 0.950
EGS36306.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
     0.949
dnaK
Chaperone protein DnaK; Identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350.
  
 0.672
alaS
alanine--tRNA ligase; Identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344.
   
 0.662
dnaJ
Chaperone protein DnaJ; Identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349.
   
 0.649
EGS38172.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515.
    
 0.633
EGS36437.1
Tex-like protein N-terminal domain protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371.
   
 0.624
EGS37423.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Identified by match to protein family HMM PF00160.
  
 0.584
rpoB
DNA-directed RNA polymerase, beta subunit; Identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013.
  
 0.524
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.