STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36303.1Zinc-binding alcohol dehydrogenase family protein; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR02817. (340 aa)    
Predicted Functional Partners:
EGS36320.1
Conserved domain protein.
       0.773
EGS36322.1
Hypothetical protein.
       0.773
adh
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465.
  
 0.694
EGS39437.1
Putative succinate-semialdehyde dehydrogenase (NAD(P)(+)); Identified by match to protein family HMM PF00171.
  
 0.608
EGS37297.1
4Fe-4S binding domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037.
  
  
 0.520
EGS37363.1
Hypothetical protein.
 
    0.514
htrA
Serine protease do-like HtrA; Identified by match to protein family HMM PF00089.
   
  
 0.490
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Identified by match to protein family HMM PF00926; match to protein family HMM TIGR00506.
     
 0.466
ribA
GTP cyclohydrolase II; Identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00505; match to protein family HMM TIGR00506.
     
 0.466
ribD
Riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00326.
     
 0.464
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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