Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGV08958.1 | EGV09758.1 | HMPREF9127_1544 | HMPREF9127_0083 | Putative membrane protein. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.753 |
| EGV08958.1 | EGV09779.1 | HMPREF9127_1544 | HMPREF9127_0082 | Putative membrane protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.701 |
| EGV08958.1 | EGV10065.1 | HMPREF9127_1544 | HMPREF9127_0471 | Putative membrane protein. | ABC transporter, ATP-binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.760 |
| EGV08991.1 | EGV09758.1 | HMPREF9127_1173 | HMPREF9127_0083 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.595 |
| EGV09179.1 | EGV09758.1 | HMPREF9127_1489 | HMPREF9127_0083 | ABC transporter transmembrane region. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.586 |
| EGV09179.1 | EGV10032.1 | HMPREF9127_1489 | HMPREF9127_0647 | ABC transporter transmembrane region. | ABC transporter transmembrane region. | 0.499 |
| EGV09210.1 | EGV09758.1 | HMPREF9127_1580 | HMPREF9127_0083 | Hypothetical protein. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.782 |
| EGV09210.1 | EGV09779.1 | HMPREF9127_1580 | HMPREF9127_0082 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.752 |
| EGV09210.1 | EGV10065.1 | HMPREF9127_1580 | HMPREF9127_0471 | Hypothetical protein. | ABC transporter, ATP-binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.752 |
| EGV09664.1 | EGV09758.1 | HMPREF9127_0081 | HMPREF9127_0083 | Conserved domain protein. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.916 |
| EGV09664.1 | EGV09779.1 | HMPREF9127_0081 | HMPREF9127_0082 | Conserved domain protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.941 |
| EGV09664.1 | EGV10065.1 | HMPREF9127_0081 | HMPREF9127_0471 | Conserved domain protein. | ABC transporter, ATP-binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.752 |
| EGV09664.1 | brnQ_1 | HMPREF9127_0081 | HMPREF9127_0084 | Conserved domain protein. | Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids. | 0.515 |
| EGV09758.1 | EGV08958.1 | HMPREF9127_0083 | HMPREF9127_1544 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Putative membrane protein. | 0.753 |
| EGV09758.1 | EGV08991.1 | HMPREF9127_0083 | HMPREF9127_1173 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.595 |
| EGV09758.1 | EGV09179.1 | HMPREF9127_0083 | HMPREF9127_1489 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | ABC transporter transmembrane region. | 0.586 |
| EGV09758.1 | EGV09210.1 | HMPREF9127_0083 | HMPREF9127_1580 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.782 |
| EGV09758.1 | EGV09664.1 | HMPREF9127_0083 | HMPREF9127_0081 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Conserved domain protein. | 0.916 |
| EGV09758.1 | EGV09779.1 | HMPREF9127_0083 | HMPREF9127_0082 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.748 |
| EGV09758.1 | EGV09846.1 | HMPREF9127_0083 | HMPREF9127_0062 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | ABC transporter, ATP-binding protein. | 0.843 |
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