STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEH_02290Hypothetical protein. (351 aa)    
Predicted Functional Partners:
iscU
Putative iron-sulfur cluster assembly protein IscU.
   
    0.671
TEH_01480
Hypothetical protein; The N-terminus of this ORF was identified by Edman sequencing.
  
     0.517
TEH_02300
Hypothetical protein.
       0.516
mreD
Putative rod shape-determining protein MreD.
  
     0.487
TEH_12790
Aspartate racemase; The N-terminus of this ORF was identified by Edman sequencing; Belongs to the aspartate/glutamate racemases family.
   
    0.482
pheT
phenylalanyl-tRNA synthetase beta chain; The N-terminus of this ORF was identified by Edman sequencing; protein synonym:phenylalanine--tRNA ligase; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.473
TEH_16040
Hypothetical protein.
  
     0.463
TEH_04690
Putative acetyltransferase.
  
     0.442
TEH_15190
Hypothetical protein.
 
     0.438
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
     
 0.411
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.