STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEH_03740Hypothetical protein. (80 aa)    
Predicted Functional Partners:
TEH_03730
Putative polysaccharide biosynthesis protein; Fragment.
 
    0.797
TEH_03750
Hypothetical protein.
       0.671
TEH_10060
Hypothetical protein; The N-terminus of this ORF was identified by Edman sequencing.
 
  
 0.660
TEH_03720
Putative polysaccharide biosynthesis protein; Fragment.
  
    0.604
TEH_24310
Hypothetical protein; The N-terminus of this ORF was identified by Edman sequencing.
 
  
 0.596
TEH_24340
Hypothetical protein; The N-terminus of this ORF was identified by Edman sequencing.
 
  
 0.575
TEH_10330
Hypothetical protein.
 
    0.562
TEH_07820
Hypothetical protein.
  
  
 0.533
TEH_00950
Putative C56 family peptidase; The N-terminus of this ORF was identified by Edman sequencing.
  
  
 0.506
TEH_10030
Hypothetical protein; The N-terminus of this ORF was identified by Edman sequencing.
 
  
 0.485
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.