STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacAGalactose-6-phosphate isomerase LacA subunit. (142 aa)    
Predicted Functional Partners:
lacB
Galactose-6-phosphate isomerase LacB subunit.
 
0.994
lacC
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
 
 0.983
lacC-3
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
 
 0.957
pfk
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
 
 0.917
lacB-2
Galactose-6-phosphate isomerase LacB subunit.
 
 
0.844
lacB-3
Galactose-6-phosphate isomerase LacB subunit.
 
 
0.844
lacD
Protein synonym:tagatose-bisphosphate aldolase; Belongs to the aldolase LacD family.
  
  
 0.788
TEH_04490
Putative hydrolase.
       0.677
lacC-2
Tagatose-6-phosphate kinase.
  
  
 0.596
TEH_04440
Putative phosphotransferase system enzyme IIC component; Protein synonym:PTS sugar-specific EIIC component.
  
    0.542
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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