STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEH_05400Carbamate kinase; Fragment. (200 aa)    
Predicted Functional Partners:
TEH_01280
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.963
arcB
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.957
gdh
NAD(P)-dependent glutamate dehydrogenase; The N-terminus of this ORF was identified by Edman sequencing; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.907
glnA
Glutamine synthetase; The N-terminus of this ORF was identified by Edman sequencing; protein synonym:glutamate--ammonia ligase.
     
 0.906
glnA-2
Glutamine synthetase; The N-terminus of this ORF was identified by Edman sequencing; protein synonym:glutamate--ammonia ligase.
     
 0.906
pyrB
Protein synonym:aspartate transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.832
arcC-2
Carbamate kinase; Belongs to the carbamate kinase family.
  
  
 
0.814
arcC
Carbamate kinase; Belongs to the carbamate kinase family.
  
  
 
0.810
carA
Putative carbamoyl-phosphate synthase small chain; Protein synonym:carbamoyl-phosphate synthetase glutamine chain; Belongs to the CarA family.
     
 0.807
arcC-3
Carbamate kinase; Belongs to the carbamate kinase family.
  
  
 
0.806
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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