STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lplA-2Lipoate-protein ligase A. (337 aa)    
Predicted Functional Partners:
TEH_17820
Hypothetical protein.
 
  
 0.953
lplA
Lipoate-protein ligase A.
  
  
 
0.906
TEH_09530
Hypothetical protein.
     
  0.900
lpd-2
Dihydrolipoamide dehydrogenase; The N-terminus of this ORF was identified by Edman sequencing; protein synonym:pyruvate dehydrogenase E3 component.
 
 
 0.778
TEH_01710
GcvH family protein.
 
 
 0.774
pdhC
Dihydrolipoamide acetyltransferase; Protein synonym:pyruvate dehydrogenase E2 component.
 
 0.700
lpd
Protein synonym:acetoin dehydrogenase E3 component.
 
 
 0.696
TEH_07200
Putative aldo-keto reductase.
  
    0.646
acoC
Dihydrolipoamide acetyltransferase; Protein synonym:acetoin dehydrogenase E2 component.
 
 0.628
pdhB
Pyruvate dehydrogenase E1 component beta subunit; The N-terminus of this ORF was identified by Edman sequencing; protein synonym:pyruvate decarboxylase.
 
 
 0.501
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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