STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEH_08260Putative phage integrase; Belongs to the 'phage' integrase family. (392 aa)    
Predicted Functional Partners:
TEH_08310
Putative Xre family DNA-binding protein.
 
  
 0.538
TEH_08300
Hypothetical protein.
 
  
 0.532
TEH_08270
Hypothetical protein.
       0.468
TEH_08280
Hypothetical protein.
       0.468
tyrA
Prephenate dehydrogenase.
  
    0.462
comFC
Putative competence protein ComFC.
  
    0.461
TEH_08390
Hypothetical protein.
 
  
 0.452
TEH_08290
Hypothetical protein.
       0.451
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
   
    0.436
purR
Pur operon repressor.
   
    0.410
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.