STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEH_10490OmpR family two-component response regulator. (223 aa)    
Predicted Functional Partners:
TEH_10500
Putative two-component histidine kinase.
 
 0.984
TEH_10520
Putative ABC transporter permease protein.
 
  
 0.895
TEH_10510
Putative ABC transporter ATP-binding protein.
 
   
 0.880
TEH_00890
Two-component histidine kinase; Fragment.
 
 
 0.871
TEH_17300
Two-component histidine kinase.
 
 0.845
TEH_14590
Putative two-component histidine kinase.
 
 0.841
TEH_10320
Two-component histidine kinase.
 
 0.830
TEH_11190
Two-component histidine kinase.
 
 0.766
TEH_25190
Two-component histidine kinase.
 
 0.762
TEH_09060
Two-component histidine kinase.
 
 0.750
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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