STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEH_10860Oxidoreductase. (247 aa)    
Predicted Functional Partners:
fabD
malonyl-CoA--acyl carrier protein transacylase; The N-terminus of this ORF was identified by Edman sequencing; protein synonym:[acyl-carrier-protein] S-malonyltransferase.
 
 0.786
TEH_10870
Hypothetical protein.
       0.718
fabF
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.671
TEH_06430
Pyruvate--flavodoxin oxidoreductase.
   
 
 0.668
TEH_14250
Hypothetical protein.
   
 
 0.640
TEH_16660
Hypothetical protein.
   
 
 0.640
TEH_10880
Putative oxidoreductase.
  
 
 0.554
TEH_20560
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.548
TEH_14610
Hypothetical protein.
   
 0.531
mvaE
acetoacetyl-CoA thiolase/3-hydroxy-3-methylglutaryl-CoA reductase; Bifunctional protein; protein synonym:HMG-CoA reductase; protein synonym:acetyl-CoA acetyltransferase.
 
 0.515
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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