STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEH_12250Putative oxidoreductase. (343 aa)    
Predicted Functional Partners:
TEH_12240
Hypothetical protein.
 
  
 0.972
idh
Myo-inositol 2-dehydrogenase.
  
  
 
0.928
TEH_12230
Hypothetical protein.
 
  
 0.903
TEH_12220
Putative oxidoreductase.
 
    
0.827
TEH_12210
Putative AraC family transcriptional regulator.
 
  
 0.698
TEH_11410
Putative oxidoreductase.
  
     0.653
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.572
TEH_03470
Hypothetical protein.
  
  
 0.559
TEH_12260
Putative sugar ABC transporter sugar-binding protein.
 
   
 0.539
lysS
lysyl-tRNA synthetase; Protein synonym:lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.519
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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