STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEH_19000Hypothetical protein. (200 aa)    
Predicted Functional Partners:
hsdM
Type I restriction-modification system DNA methylase; Protein synonym:type I restriction enzyme M protein.
 
 
 0.963
hsdR
Type I restriction-modification system restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.937
TEH_18990
Putative site-specific recombinase; Belongs to the 'phage' integrase family.
 
   
 0.762
hsdS
Type I restriction-modification system specificity subunit; Protein synonym:type I restriction enzyme S protein.
 
    
0.634
TEH_14890
Hypothetical protein.
  
    0.549
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.511
atpF
ATP synthase B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.504
TEH_18960
Mrr restriction system protein; Fragment.
  
  
 0.456
TEH_18950
Mrr restriction system protein; Fragment.
  
  
 0.431
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
   0.411
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.