STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEH_21100Hypothetical protein. (140 aa)    
Predicted Functional Partners:
TEH_14270
Hypothetical protein.
  
     0.633
TEH_14260
Hypothetical protein.
  
     0.624
TEH_17810
Hypothetical protein.
  
     0.606
TEH_24550
Hypothetical protein.
  
     0.598
TEH_15860
Hypothetical protein.
  
     0.531
mreD
Putative rod shape-determining protein MreD.
  
     0.526
TEH_24630
Hypothetical protein.
  
     0.524
TEH_14390
Hypothetical protein.
  
     0.463
TEH_21060
Hypothetical protein.
  
     0.452
TEH_19570
Hypothetical protein; Belongs to the UPF0374 family.
  
     0.437
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.