STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacR-3Lactose operon repressor. (250 aa)    
Predicted Functional Partners:
fruI
Fructose-specific phosphotransferase system enzyme II; Protein synonym:PTS fructose-specific EIIABC component; protein synonym:protein-Npi-phosphohistidine--sugar phosphotransferase.
  
  
 0.674
fruK-2
1-phosphofructokinase; The N-terminus of this ORF was identified by Edman sequencing; protein synonym:fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.591
lacC-3
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.584
lacC
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.577
lacC-2
Tagatose-6-phosphate kinase.
 
  
 0.577
TEH_11470
Putative fructose-specific phosphotransferase system enzyme IIBC component; Protein synonym:PTS fructose-specific EIIBC component.
  
  
 0.527
fruC
Protein synonym:PTS fructose-specific EIIBC component.
  
  
 0.527
lacB
Galactose-6-phosphate isomerase LacB subunit.
  
  
 0.523
lacB-2
Galactose-6-phosphate isomerase LacB subunit.
  
  
 0.523
lacB-3
Galactose-6-phosphate isomerase LacB subunit.
  
  
 0.523
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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