A0A0D2P9P1 protein (Hypholoma sublateritium)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0D2P9P1

PPM-type phosphatase domain-containing protein. (340 aa)

Predicted Functional Partners:

A0A0D2PQ29

0.750

A0A0D2PGH8

0.713

A0A0D2NXK5

0.677

A0A0D2PCC5

0.677

A0A0D2NHP1

0.660

A0A0D2KMV3

0.647

A0A0D2MYU2

0.647

A0A0D2P6A1

0.647

A0A0D2Q6Q7

0.640

A0A0D2PA79

0.637

Your Current Organism:

Hypholoma sublateritium

NCBI taxonomy Id: 945553
Other names: H. sublateritium FD-334 SS-4, Hypholoma sublateritium FD-334 SS-4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2KMV3	A0A0D2MYU2	Lipoyl-binding domain-containing protein.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.942
A0A0D2KMV3	A0A0D2NHP1	Lipoyl-binding domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.991
A0A0D2KMV3	A0A0D2NXK5	Lipoyl-binding domain-containing protein.	E1_dh domain-containing protein.	0.954
A0A0D2KMV3	A0A0D2P6A1	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.436
A0A0D2KMV3	A0A0D2P9P1	Lipoyl-binding domain-containing protein.	PPM-type phosphatase domain-containing protein.	0.647
A0A0D2KMV3	A0A0D2PCC5	Lipoyl-binding domain-containing protein.	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.974
A0A0D2KMV3	A0A0D2PGH8	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.751
A0A0D2KMV3	A0A0D2PQ29	Lipoyl-binding domain-containing protein.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.993
A0A0D2KMV3	A0A0D2Q6Q7	Lipoyl-binding domain-containing protein.	Transket_pyr domain-containing protein.	0.961
A0A0D2MYU2	A0A0D2KMV3	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Lipoyl-binding domain-containing protein.	0.942
A0A0D2MYU2	A0A0D2NHP1	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Dihydrolipoyl dehydrogenase.	0.999
A0A0D2MYU2	A0A0D2NXK5	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	E1_dh domain-containing protein.	0.995
A0A0D2MYU2	A0A0D2P6A1	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Uncharacterized protein.	0.969
A0A0D2MYU2	A0A0D2P9P1	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	PPM-type phosphatase domain-containing protein.	0.647
A0A0D2MYU2	A0A0D2PCC5	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.997
A0A0D2MYU2	A0A0D2PGH8	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Uncharacterized protein.	0.751
A0A0D2MYU2	A0A0D2PQ29	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.999
A0A0D2MYU2	A0A0D2Q6Q7	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Transket_pyr domain-containing protein.	0.971
A0A0D2NHP1	A0A0D2KMV3	Dihydrolipoyl dehydrogenase.	Lipoyl-binding domain-containing protein.	0.991
A0A0D2NHP1	A0A0D2MYU2	Dihydrolipoyl dehydrogenase.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.999