STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IALB_0116Dehydrogenase. (232 aa)    
Predicted Functional Partners:
IALB_0115
Flavoprotein.
 
     0.890
IALB_1340
Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.722
fruK
1-Phosphofructokinase.
   
    0.673
IALB_2996
Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.666
IALB_0117
Hypothetical protein.
 
     0.657
IALB_0282
Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.644
IALB_1665
AP superfamily protein.
   
 
 0.625
IALB_2485
Polyketide synthase-like protein.
  
 
 0.605
IALB_0056
Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.590
IALB_0055
Hypothetical protein.
  
     0.568
Your Current Organism:
Ignavibacterium album
NCBI taxonomy Id: 945713
Other names: Chlorobi bacterium Mat9-16, I. album JCM 16511, Ignavibacterium album JCM 16511, Ignavibacterium album Mat9-16, Ignavibacterium album str. JCM 16511, Ignavibacterium album strain JCM 16511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.