STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IALB_0384Peptide/nickel transport system permease protein. (328 aa)    
Predicted Functional Partners:
IALB_0383
Peptide/nickel transport system substrate-binding protein.
 0.999
IALB_0385
Peptide/nickel transport system permease protein.
 
 0.999
IALB_0382
Peptide/nickel transport system ATP-binding protein.
 0.998
IALB_0381
Peptide/nickel transport system ATP-binding protein.
  
 0.981
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
 
    0.644
IALB_0380
Hypothetical protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.546
guaA
GMP synthase ATPase subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.464
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
      0.432
pabBC
4-amino-4-deoxychorismate lyase.
  
   
 0.423
IALB_0386
Serine/threonine protein kinase.
       0.416
Your Current Organism:
Ignavibacterium album
NCBI taxonomy Id: 945713
Other names: Chlorobi bacterium Mat9-16, I. album JCM 16511, Ignavibacterium album JCM 16511, Ignavibacterium album Mat9-16, Ignavibacterium album str. JCM 16511, Ignavibacterium album strain JCM 16511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.