STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IALB_0519Isocitrate dehydrogenase. (466 aa)    
Predicted Functional Partners:
acnA
Aconitase A.
 0.954
leuB-2
3-isopropylmalate dehydrogenase.
  
  
 
0.921
leuB
3-isopropylmalate dehydrogenase.
  
  
 
0.908
korA-2
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.908
icd
Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
     
 0.904
korD
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
     
  0.900
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
  0.900
korB
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
   
 
  0.900
korG
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
     
  0.900
korB-2
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
   
 
  0.900
Your Current Organism:
Ignavibacterium album
NCBI taxonomy Id: 945713
Other names: Chlorobi bacterium Mat9-16, I. album JCM 16511, Ignavibacterium album JCM 16511, Ignavibacterium album Mat9-16, Ignavibacterium album str. JCM 16511, Ignavibacterium album strain JCM 16511
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