STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IALB_1036Zn-dependent oxidoreductase. (339 aa)    
Predicted Functional Partners:
IALB_2485
Polyketide synthase-like protein.
 
 
 0.965
fabD
[acyl-carrier-protein] S-malonyltransferase.
 
    
 0.916
fabF
3-Oxoacyl-(acyl-carrier-protein) synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.909
fabF-2
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.909
dhbF
Nonribosomal peptide synthetase DhbF; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.755
fadH
NADPH-dependent 2,4-dienoyl-CoA reductase.
  
 
 0.539
IALB_1035
Putative membrane GTPase.
       0.504
IALB_2363
Putative reductase.
  
  
 0.463
IALB_1037
Glutamate formiminotransferase.
  
    0.454
aguB
N-carbamoylputrescine amidase.
     
 0.445
Your Current Organism:
Ignavibacterium album
NCBI taxonomy Id: 945713
Other names: Chlorobi bacterium Mat9-16, I. album JCM 16511, Ignavibacterium album JCM 16511, Ignavibacterium album Mat9-16, Ignavibacterium album str. JCM 16511, Ignavibacterium album strain JCM 16511
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.