STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IALB_1084PKD repeat protein. (669 aa)    
Predicted Functional Partners:
IALB_1083
Hypothetical protein.
 
     0.828
IALB_2163
BNR/Asp-box repeat protein.
  
     0.751
IALB_0478
Hypothetical protein.
  
     0.748
IALB_2656
Hypothetical protein.
  
     0.737
IALB_1788
BNR/Asp-box repeat protein.
  
     0.735
IALB_3039
5'-Nucleotidase domain protein.
  
     0.718
IALB_2059
Peptidase S8/S53 subtilisin kexin sedolisin.
  
    0.703
IALB_1082
Hypothetical protein.
 
 
   0.689
IALB_0843
Hypothetical protein.
  
     0.682
IALB_1488
Hypothetical protein.
  
   0.671
Your Current Organism:
Ignavibacterium album
NCBI taxonomy Id: 945713
Other names: Chlorobi bacterium Mat9-16, I. album JCM 16511, Ignavibacterium album JCM 16511, Ignavibacterium album Mat9-16, Ignavibacterium album str. JCM 16511, Ignavibacterium album strain JCM 16511
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.