STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IALB_1191ABC-type sugar transport system ATPase subunit; Belongs to the ABC transporter superfamily. (369 aa)    
Predicted Functional Partners:
IALB_1188
ABC-type sugar transport system permease subunit.
 
 0.999
IALB_1189
ABC-type sugar transport system permease subunit.
 
 0.999
IALB_1187
ABC-type sugar transport system periplasmic subunit.
 
 
 0.993
IALB_1204
Hypothetical protein.
  
 
 0.973
IALB_2589
ABC-type sugar transport system periplasmic component.
 
 
 0.959
IALB_0382
Peptide/nickel transport system ATP-binding protein.
 
   
 0.948
IALB_0853
ABC-type transport system ATPase component.
 
     
0.899
IALB_2919
ABC-type multidrug transport system permease component.
 
    
 0.806
IALB_1190
Hypothetical protein.
       0.768
IALB_2918
ABC-type multidrug transport system permease component.
 
    
 0.761
Your Current Organism:
Ignavibacterium album
NCBI taxonomy Id: 945713
Other names: Chlorobi bacterium Mat9-16, I. album JCM 16511, Ignavibacterium album JCM 16511, Ignavibacterium album Mat9-16, Ignavibacterium album str. JCM 16511, Ignavibacterium album strain JCM 16511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.