STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_02515Hypothetical protein. (340 aa)    
Predicted Functional Partners:
W5A_02520
RagB/SusD domain-containing protein.
 
    0.890
W5A_02525
TonB-dependent receptor plug; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.857
W5A_02495
Nb031; Nematoblast specific protein.
 
     0.754
W5A_02500
Outer membrane protein.
  
    0.672
W5A_02510
Hypothetical protein.
 
   
0.633
W5A_12451
Putative exported alpha-galactosidase; COG3345 Alpha-galactosidase.
  
  
  0.500
W5A_02505
Hypothetical protein.
  
     0.497
W5A_03104
Exo-alpha-sialidase; COG4409 Neuraminidase (sialidase).
  
     0.457
W5A_03124
TonB-dependent receptor plug; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.455
W5A_07572
RagB/SusD domain protein.
  
    0.452
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.