STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_02725Serine beta-lactamase-like protein LACTB; COG1680 Beta-lactamase class C and other penicillin binding proteins. (391 aa)    
Predicted Functional Partners:
W5A_02720
Lipoprotein; COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
       0.773
W5A_02715
Lipid A 3-O-deacylase-like protein.
       0.618
W5A_02710
COG0685 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
       0.533
W5A_02705
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.480
W5A_10954
D-Ala-D-Ala dipeptidase 5; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
      0.471
W5A_09365
Hypothetical protein.
  
     0.456
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.454
W5A_02700
Homocysteine S-methyltransferase; COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
       0.441
W5A_10994
COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
     0.435
W5A_06386
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.429
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.