STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_03074Lactase; COG3250 Beta-galactosidase/beta-glucuronidase. (1049 aa)    
Predicted Functional Partners:
W5A_12451
Putative exported alpha-galactosidase; COG3345 Alpha-galactosidase.
 
 
 0.815
W5A_03069
Glucosamine-6-sulfatase; COG3119 Arylsulfatase A and related enzymes.
  
  0.749
W5A_04973
Glycosyl hydrolase; COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.713
W5A_11329
Galactose mutarotase; Converts alpha-aldose to the beta-anomer.
 
 
 0.697
W5A_03064
Hypothetical protein.
       0.594
galK
Galactose kinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.531
W5A_09234
Putative lipoprotein; COG3669 Alpha-L-fucosidase.
   
 0.496
W5A_02535
1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB).
   
    0.461
W5A_12941
COG3250 Beta-galactosidase/beta-glucuronidase.
  
  
 
0.450
W5A_03059
N-acetylneuraminate lyase; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
       0.436
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.