STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_03114COG2186 Transcriptional regulators. (266 aa)    
Predicted Functional Partners:
W5A_03104
Exo-alpha-sialidase; COG4409 Neuraminidase (sialidase).
 
     0.849
W5A_03109
COG2942 N-acyl-D-glucosamine 2-epimerase.
 
     0.813
W5A_03119
RagB/SusD domain-containing protein.
  
     0.735
W5A_03124
TonB-dependent receptor plug; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
    0.733
W5A_03094
beta-N-acetylhexosaminidase; COG3525 N-acetyl-beta-hexosaminidase.
 
     0.683
W5A_03059
N-acetylneuraminate lyase; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
 
   
 0.680
W5A_03079
Sialate O-acetylesterase.
 
     0.656
W5A_03099
Creatinine amidohydrolase; COG1402 Uncharacterized protein, putative amidase.
 
     0.623
W5A_03089
Hypothetical protein; COG1380 Putative effector of murein hydrolase LrgA.
       0.568
W5A_03084
LrgB-like protein; COG1346 Putative effector of murein hydrolase.
       0.486
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.