STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_03619COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. (344 aa)    
Predicted Functional Partners:
W5A_06258
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.913
panD
Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.901
W5A_03239
COG0527 Aspartokinases; Belongs to the aspartokinase family.
  
  
  0.880
W5A_02660
Bifunctional aspartokinase I/homoserine dehydrogenase I; COG2021 Homoserine acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
    
 0.879
W5A_02665
COG0527 Aspartokinases.
    
 0.879
asnB
Asparagine synthetase B; COG0367 Asparagine synthase (glutamine-hydrolyzing).
     
 0.879
W5A_02445
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 
 0.878
W5A_12366
COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
 0.871
W5A_05743
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
    
 0.870
W5A_06128
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
    
 0.870
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.