STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_03974COG2825 Outer membrane protein. (296 aa)    
Predicted Functional Partners:
W5A_03979
COG4775 Outer membrane protein/protective antigen OMA87.
 
  
 0.896
W5A_03969
COG2825 Outer membrane protein.
 
     0.864
W5A_03989
Hypothetical protein.
 
 
   0.861
W5A_08897
Hypothetical protein.
  
    0.745
W5A_06670
Hypothetical protein.
  
     0.738
W5A_06153
PorT protein.
 
     0.737
W5A_03849
Hypothetical protein.
  
     0.736
W5A_03984
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.721
W5A_03749
Hypothetical protein; COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
  
     0.700
W5A_01955
COG0642 Signal transduction histidine kinase.
  
     0.648
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.