STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_04139Putative peptidylprolyl isomerase; COG0760 Parvulin-like peptidyl-prolyl isomerase. (706 aa)    
Predicted Functional Partners:
W5A_04124
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 
   0.742
W5A_09069
COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.713
W5A_08944
COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
   
 0.690
W5A_12836
Rotamase; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
   
 0.690
W5A_04129
Hypothetical protein.
 
     0.649
W5A_10774
Hypothetical protein.
  
     0.601
W5A_12791
Hypothetical protein; COG0457 FOG: TPR repeat.
  
    0.599
W5A_00980
Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
     0.595
W5A_09350
Putative hydrolase.
  
     0.574
W5A_05313
Hypothetical protein; COG0078 Ornithine carbamoyltransferase.
  
     0.570
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.