STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_04164Amino acid/peptide transporter; COG3104 Dipeptide/tripeptide permease. (588 aa)    
Predicted Functional Partners:
W5A_04159
Proton/peptide symporter family protein; COG3104 Dipeptide/tripeptide permease.
 
    
0.725
W5A_04154
Dipeptidyl-peptidase iv; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
 
    0.713
W5A_04169
COG1331 Highly conserved protein containing a thioredoxin domain.
       0.587
W5A_04144
GHMP kinase; COG1577 Mevalonate kinase.
   
   0.490
W5A_04149
hydroxymethylglutaryl-CoA reductase, degradative; COG1257 Hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
       0.453
W5A_07020
COG3279 Response regulator of the LytR/AlgR family.
  
     0.428
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.