STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_04249Hypothetical protein. (137 aa)    
Predicted Functional Partners:
W5A_04259
COG1538 Outer membrane protein.
 
     0.664
W5A_13200
Hypothetical protein.
  
     0.622
W5A_11566
Non-peptidase.
  
     0.616
W5A_04254
Acriflavin resistance protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.603
W5A_00470
Hypothetical protein.
  
     0.601
W5A_04274
Hypothetical protein.
 
     0.599
W5A_12196
Hypothetical protein.
  
     0.591
W5A_04264
Efflux transporter, rnd family, mfp subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.584
W5A_11906
COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
     0.581
W5A_07377
Hypothetical protein.
  
     0.579
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.