STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_04758COG1131 ABC-type multidrug transport system, ATPase component. (239 aa)    
Predicted Functional Partners:
W5A_04753
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
   0.970
W5A_04748
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
  0.954
W5A_00245
ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component.
 
 
 
  0.923
W5A_00250
COG0842 ABC-type multidrug transport system, permease component.
 
 
 
  0.923
W5A_05823
COG1137 ABC-type (unclassified) transport system, ATPase component.
 
    
0.890
W5A_04743
COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.773
W5A_12191
ABC transporter permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
      0.675
W5A_08999
COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
  0.545
atpG
F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.539
atpA
F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.537
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.