STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_05768Hypothetical protein; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family. (405 aa)    
Predicted Functional Partners:
W5A_05753
Hypothetical protein.
 
     0.733
W5A_05763
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.726
W5A_05758
COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.720
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.588
W5A_05783
Histidine kinase; COG0642 Signal transduction histidine kinase.
   
 
 0.530
W5A_05778
COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.525
W5A_05743
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
     
 0.432
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.429
W5A_10507
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
  
 
 0.411
W5A_10045
Nitrite reductase; COG2132 Putative multicopper oxidases.
  
 
 0.405
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.