STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_05908LAO/AO transport system ATPase; COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family. (364 aa)    
Predicted Functional Partners:
W5A_12696
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
  
 0.977
W5A_00970
COG0346 Lactoylglutathione lyase and related lyases.
     0.966
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
  
0.826
W5A_12691
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
 
  
 0.809
W5A_05918
Lipid A biosynthesis domain-containing protein; COG3952 Predicted membrane protein.
       0.629
W5A_05913
COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.628
W5A_05923
UDP-phosphate alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
       0.628
W5A_05928
ArnT-like undecaprenyl-phosphate alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
       0.628
W5A_05933
Hypothetical protein.
       0.628
W5A_05893
Hypothetical protein.
       0.539
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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