STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_06223Hypothetical protein. (265 aa)    
Predicted Functional Partners:
W5A_06228
Putative tansport protein; COG0848 Biopolymer transport protein.
 
   0.965
W5A_06233
COG0811 Biopolymer transport proteins.
 
 
 0.961
W5A_10774
Hypothetical protein.
  
   0.839
W5A_08232
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
   0.834
W5A_12936
OmpA/MotB domain-containing protein; COG0457 FOG: TPR repeat.
 
 
 
 0.809
W5A_06218
COG0285 Folylpolyglutamate synthase.
       0.799
W5A_03634
Biopolymer transport protein exbD2.
 
   0.743
W5A_08237
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.741
W5A_04124
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.730
W5A_04344
Hypothetical protein.
  
     0.703
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.