Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| W5A_06258 | W5A_06730 | W5A_06258 | W5A_06730 | Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.496 |
| W5A_06258 | pcm | W5A_06258 | W5A_06740 | Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.497 |
| W5A_06600 | mltG | W5A_06600 | W5A_06555 | Bifunctional riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.432 |
| W5A_06600 | pcm | W5A_06600 | W5A_06740 | Bifunctional riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.444 |
| W5A_06720 | W5A_06725 | W5A_06720 | W5A_06725 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.648 |
| W5A_06720 | W5A_06730 | W5A_06720 | W5A_06730 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.616 |
| W5A_06720 | W5A_06735 | W5A_06720 | W5A_06735 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | Oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins. | 0.582 |
| W5A_06720 | miaA | W5A_06720 | W5A_06710 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.747 |
| W5A_06720 | pcm | W5A_06720 | W5A_06740 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.495 |
| W5A_06725 | W5A_06720 | W5A_06725 | W5A_06720 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.648 |
| W5A_06725 | W5A_06730 | W5A_06725 | W5A_06730 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.799 |
| W5A_06725 | W5A_06735 | W5A_06725 | W5A_06735 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins. | 0.746 |
| W5A_06725 | miaA | W5A_06725 | W5A_06710 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.650 |
| W5A_06725 | pcm | W5A_06725 | W5A_06740 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.499 |
| W5A_06730 | W5A_06258 | W5A_06730 | W5A_06258 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1. | 0.496 |
| W5A_06730 | W5A_06720 | W5A_06730 | W5A_06720 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.616 |
| W5A_06730 | W5A_06725 | W5A_06730 | W5A_06725 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.799 |
| W5A_06730 | W5A_06735 | W5A_06730 | W5A_06735 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | Oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins. | 0.854 |
| W5A_06730 | miaA | W5A_06730 | W5A_06710 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.582 |
| W5A_06730 | pcm | W5A_06730 | W5A_06740 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.563 |
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