STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_07262COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component. (278 aa)    
Predicted Functional Partners:
W5A_07267
Hypothetical protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
   0.956
W5A_01400
Hypothetical protein.
  
     0.702
W5A_00020
Hypothetical protein.
  
     0.688
W5A_07272
Hypothetical protein.
 
     0.669
W5A_08827
Hypothetical protein.
  
     0.649
W5A_11786
Secreted protein.
  
     0.635
W5A_01790
COG2819 Predicted hydrolase of the alpha/beta superfamily.
  
     0.628
W5A_09139
Rotamase; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
  
     0.624
W5A_01265
Hypothetical protein.
  
     0.619
W5A_02380
Lipoprotein.
  
 
 0.608
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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