STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_07672COG1466 DNA polymerase III, delta subunit. (334 aa)    
Predicted Functional Partners:
W5A_00765
DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication.
  
 
 0.999
W5A_03349
COG2176 DNA polymerase III, alpha subunit (gram-positive type).
  
 0.999
W5A_07597
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.999
dnaX
DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
 
 0.999
W5A_10457
COG0587 DNA polymerase III, alpha subunit.
   
 0.975
W5A_05178
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.939
W5A_07642
Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.873
W5A_07677
Hypothetical protein.
 
     0.815
W5A_06720
Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
 
  
 0.813
W5A_10442
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.771
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.