STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_10070Hypothetical protein; COG0790 FOG: TPR repeat, SEL1 subfamily. (462 aa)    
Predicted Functional Partners:
W5A_10075
Hypothetical protein.
       0.723
W5A_10080
Hypothetical protein.
       0.635
W5A_10065
Sel1 domain-containing protein repeat-containing protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
       0.613
W5A_01555
Two-component system sensor histidine kinase; COG0642 Signal transduction histidine kinase.
    
 0.574
W5A_11069
Integral membrane sensor signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
    
 0.574
W5A_10095
COG3209 Rhs family protein.
  
    0.569
W5A_10085
Hypothetical protein.
       0.544
W5A_10090
Hypothetical protein.
       0.544
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.511
W5A_10100
Hypothetical protein.
       0.466
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.