STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_10115Putative regulator of cell autolysis; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. (508 aa)    
Predicted Functional Partners:
W5A_10120
LytTr DNA-binding domain family protein; COG3279 Response regulator of the LytR/AlgR family.
 
  0.963
W5A_12841
COG3279 Response regulator of the LytR/AlgR family.
  
  0.848
W5A_04843
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
  
  0.847
W5A_04034
COG3279 Response regulator of the LytR/AlgR family.
 
  0.845
W5A_12216
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
 
  0.845
W5A_08032
Two component transcriptional regulator, lyttr family protein; COG3279 Response regulator of the LytR/AlgR family.
 
  0.843
W5A_12576
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
 
  0.841
W5A_07020
COG3279 Response regulator of the LytR/AlgR family.
 
  0.612
W5A_04853
Signal transduction histidine kinase LytS; COG3275 Putative regulator of cell autolysis.
  
  
 
0.418
W5A_12846
Two-component system sensor histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
  
 
0.412
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.