STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_10879Hypothetical protein; COG1452 Organic solvent tolerance protein OstA. (900 aa)    
Predicted Functional Partners:
W5A_11109
Hypothetical protein; COG2317 Zn-dependent carboxypeptidase.
  
     0.744
W5A_10884
Endoribonuclease l-psp; COG0251 Putative translation initiation inhibitor, yjgF family.
       0.741
W5A_12736
Hypothetical protein.
  
    0.690
W5A_04304
Hypothetical protein.
  
     0.658
W5A_09430
YjgP/YjgQ family permease; COG0795 Predicted permeases.
 
 
 0.636
W5A_00075
Hypothetical protein.
  
     0.625
W5A_09169
Permease yjgp/yjgq family protein; COG0795 Predicted permeases.
 
 
 0.618
W5A_05348
Hypothetical protein; COG2067 Long-chain fatty acid transport protein.
  
   
 0.617
W5A_10874
Cell wall hydrolase/autolysin; COG0860 N-acetylmuramoyl-L-alanine amidase.
       0.607
W5A_12791
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.605
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.