STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_12181Hypothetical protein. (107 aa)    
Predicted Functional Partners:
W5A_12171
Double-transmembrane region domain-containing protein.
 
     0.847
W5A_12186
Phospholipase/carboxylesterase; COG0400 Predicted esterase.
       0.820
W5A_12176
COG0044 Dihydroorotase and related cyclic amidohydrolases.
       0.818
W5A_07882
Membrane protein.
  
     0.737
W5A_12166
S10 family carboxypeptidase; COG2939 Carboxypeptidase C (cathepsin A).
       0.704
W5A_03889
Hypothetical protein.
  
     0.688
W5A_02105
Hypothetical protein.
  
     0.633
W5A_11429
Hypothetical protein.
   
    0.627
W5A_03609
Hypothetical protein; COG3577 Predicted aspartyl protease.
  
     0.607
W5A_04983
Hypothetical protein.
  
     0.596
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.